Alignment-free models in plant genomics : theoretical, experimental and legal issues / Humberto González-Díaz, Guilerman Aguero-Chapin, Cristian Robert Munteanu, Francisco Prado-Prado, Kuo-Chen Chou, Aliuska Duardo-Sanchez, Grace Patlewicz and Antonio López-Diaz.

Includes bibliographical references (pages [55]-70) and index.

Description based on print version record and CIP data provided by publisher.

English.

ALIGNMENT-FREE MODELS INPLANT GENOMICS:THEORETICAL, EXPERIMENTAL, AND LEGAL ISSUES; CONTENTS; PREFACE; INTRODUCTION; RESULTS AND DISCUSSION.; 1. FIRST PART: THEORETICAL BASES OFMARCH-INSIDE SEQUENCE PSEUDOFOLDINGINDICES; 1.1. CALCULATING PSEUDO-FOLDING TOPOLOGICALINDICES WITH MARCH-INSIDE APPROACH; 1.2. FINDING THE PSEUDO-FOLDING QSAR MODELSWITH LINEAR DISCRIMINANT ANALYSIS (LDA); 2. SECOND PART: MARCH-INSIDEMODELS RELEVANT TO PLANT GENOMICS; 2.1. PSEUDO-FOLDING QSAR MODELSFOR DISCOVERY OF PLANT RNASEPROTEINS AND GENE.

2.2. PSEUDO-FOLDING QSAR MODELS FORDISCOVERY OF PLANT ACOS PROTEINS AND GENE2.3. PSEUDO-FOLDING QSAR MODELSFOR DISCOVERY OF PLANT PGS PROTEINS AND GENE; 2.3. PSEUDO-FOLDING QSAR MODELSFOR ANNOTATION OF PLANT RIBOSOMALRNA AND GENE; 3. THIRD PART: LEGAL ISSUES RELATEDQSAR AND BIOINFORMATICSIN PLANT GENOMICS; 3.1. INTELLECTUAL PROPERTYISSUES IN PLANT GENOMIC; Patent on Plant; Plant Variety Protection; International Trends in Plant Variety Protection Rights; 3.2. METHODS FOR LEGAL PROTECTION OFBIOINFORMATICS COMPUTER SOFTWAREIN PLANT GENOMICS; 3.2.1. Intellectual Property Protection.

3.2.1.2. CopyrightPatent Protection in Genomics; Trade Secret Protection; Trademark Protection; Copyright and Contractual Issues; 3.2.2. Tax Issues for Software Used in Genomics; 3.3. SCIENTIFIC SOFTWARE RESULTS:LEGAL ACCEPTANCE; 3.3.1. Regulatory Uses for QSAR ModelsRelevant to Drug Design and/or Genomics; CONCLUSIONS; ACKNOWLEDGMENTS; REFERENCES; INDEX.

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