Proceedings of the 5th Asia-Pacific bioinformatics conference : Hong Kong, 15-17 January 2007 / editors, David Sankoff, Lusheng Wang, Francis Chin.

Includes bibliographical references and index.

Print version record.

High-throughput sequencing and functional genomics technologies have given us the human genome sequence as well as those of other experimentally, medically, and agriculturally important species, and have enabled large-scale genotyping and gene expression profiling of human populations. Databases containing large numbers of sequences, polymorphisms, structures, and gene expression profiles of normal and diseased tissues are being rapidly generated for human and model organisms. Bioinformatics is thus rapidly growing in importance in the annotation of genomic sequences; the understanding of the.

Exploring Genomes of Distantly Related Mammals / J.A. Marshall Graves -- Bugs, Guts and Fat -- A Systems Approach to the Metabolic 'Axis of Evil' / J. Nadeau -- Protein Identification via Spectral Networks Analysis / P. Pevzner -- Metagenome Analysis using MEGAN / D.H. Huson, A.F. Auch, J. Qi, and S.C. Schuster -- Algorithmic Approaches to Selecting Control Clones in DNA Array Hybridization Experiments / Q. Fu, E. Bent, J. Borneman, M. Chrobak, and N. Young -- Subtle Motif Discovery for Detection of DNA Regulatory Sites / M. Comin, and L. Parida -- An Effective Promoter Detection Method using the Adaboost Algorithm / X. Xze, S. Wu, K.-M. Lam, and H. Yan -- A New Strategy of Geometrical Biclustering for Microarray Data Analysis / H. Zhao, A.W.C. Liew, and H. Yan -- Using Formal Concept Analysis for Microarray Data Comparison / V. Choi, Y. Huang, V. Lam, D. Potter, R. Laubenbacher, and K. Duca -- An Efficient Biclustering Algorithm for Finding Genes with Similar Patterns in Time-series Expression Data / S.C. Madeira, and A.L. Oliveira -- Selecting Genes with Dissimilar Discrimination Strength for Sample Class Prediction / Z. Cai, R. Goebel, M.R. Salavatipour, Y. Shi, L. Xu, and G. Lin -- Computing the All-Pairs Quartet Distance on a Set of Evolutionary Trees / M. Stissing, T. Mailund, C.N.S. Pedersen, G.S. Brodal, and R. Fagerberg -- Computing the Quartet Distance Between Evolutionary Trees of Bounded Degree / M. Stissing, C.N.S. Pedersen, T. Mailund, G.S. Brodal, and R. Fagerberg -- A Global Maximum Likelihood Super-Quartet Phylogeny Method / P. Wang, B.B. Zhou, M. Taraeneh, D. Chu, C. Wang, A.Y. Zomaya, and R.P. Brent -- A Randomized Algorithm for Comparing Sets of Phylogenetic Trees / S.-J. Sul, and T.L. Williams -- Protein Structure-Structure Alignment with Discrete Frkchet Distance / M. Jiang, Y. Xu, and B. Zhu -- Deriving Protein Structure Topology from the Helix Skeleton in Low Resolution Density Map using Rosetta / Y. Lu, J. He, and C.E.M. Strauss -- Fitting Protein Chains to Cubic Lattice is NP-complete / J. Mafiuch, and D.R. Gaur -- Inferring a Chemical Structure from a Feature Vector Based on Frequency of Labeled Paths and Small Fragments / T. Alcutsu, and D. Fukagawa -- Exact and Heuristic Approaches for Identifying Disease-Associated SNP Motifs / G. Huang, P. Jeavons, and D. Kwiatkowski -- Genotype-Based Case-Control Analysis, Violation of Hardy-Weinberg Equilibrium, and Phase Diagrams / Y.J. Suh, and W. Li -- A Probabilistic Method to Identify Compensatory Substitutions for Pathogenic Mutations / B.C. Easton, A.V. Isaev, G.A. Huttley, and P. Maxwell -- Exploring Genome Rearrangements using Virtual Hybridization / M. Belcaid, A. Bergeron, A. Chateau, C. Chauve, Y. Gingras, G. Poisson, and M. Vendette -- Two Plus Two Does not Equal Three: Statistical Tests for Multiple Genome Comparison / N. Raghupathy, R. Hoberman, and D. Durand -- The Distance Between Randomly Constructed Genomes / W. Xu -- Computing the Breakpoint Distance between Partially Ordered Genomes / Z. Fu, and T. Jiang -- Inferring Gene Regulatory Networks by Machine Learning Methods / J. Supper, H. Frohlich, C. Spieth, A. Drager, and A. Zell -- A Novel Clustering Method for Analysis of Biological Networks using Maximal Components of Graphs / M. Hayashida, T. Akutsu, and H. Nagamochi -- Gene Regulatory Network Inference via Regression Based Topological Refinement / J. Supper, H. Frohlich, and A. Zell -- Algorithm Engineering for Color-Coding to Facilitate Signaling Pathway Detection / F. Huffner, S. Wernicke, and T. Zichner -- De Novo Peptide Sequencing for Mass Spectra Based on Multi-Charge Strong Tags / K. Ning, K.F. Chong, and H.W. Leong -- Complexities and Algorithms for Glycan Structure Sequencing using Tandem Mass Spectrometry / B. Shun, B. Ma, K. Zhang, and G. Lajoie -- Semi-supervised Pattern Learning for Extracting Relations from Bioscience Texts / S. Ding, M. Huang, and X. Zhu -- Flow Model of the Protein-protein Interaction Network for Finding Credible Interactions / K. Okada, K. Asai, and M. Arzta -- All Hits All The Time: Parameter Free Calculation of Seed Sensitivity / D.Y.F. Mak. and G. Benson -- Fast Structural Similarity Search Based on Topology String Matching / S.-H. Park, D. Gilbert, and K.H. Ryu -- Simple and Fast Alignment of Metabolic Pathways by Exploiting Local Diversity / S. Wernicke, and F. Rasche -- Combining N-grams and Alignment in G-protein Coupling Specificity Prediction / B.Y.M. Chen, and J.G. Carbonell.

English.

eBooks on EBSCOhost EBSCO eBook Subscription Academic Collection - Worldwide