30 years of the Comet Assay: an overview with some new insights (Record no. 2984180)

MARC details
000 -LEADER
fixed length control field 04619naaaa2200385uu 4500
001 - CONTROL NUMBER
control field https://directory.doabooks.org/handle/20.500.12854/39891
005 - DATE AND TIME OF LATEST TRANSACTION
control field 20220714164029.0
020 ## - INTERNATIONAL STANDARD BOOK NUMBER
International Standard Book Number 978-2-88919-649-4
020 ## - INTERNATIONAL STANDARD BOOK NUMBER
International Standard Book Number 9782889196494
024 7# - OTHER STANDARD IDENTIFIER
Standard number or code 10.3389/978-2-88919-649-4
Terms of availability doi
041 0# - LANGUAGE CODE
Language code of text/sound track or separate title English
042 ## - AUTHENTICATION CODE
Authentication code dc
100 1# - MAIN ENTRY--PERSONAL NAME
Personal name Andrew Collins
Relator code auth
9 (RLIN) 1578629
245 10 - TITLE STATEMENT
Title 30 years of the Comet Assay: an overview with some new insights
260 ## - PUBLICATION, DISTRIBUTION, ETC. (IMPRINT)
Name of publisher, distributor, etc Frontiers Media SA
Date of publication, distribution, etc 2015
300 ## - PHYSICAL DESCRIPTION
Extent 1 electronic resource (174 p.)
506 0# - RESTRICTIONS ON ACCESS NOTE
Terms governing access Open Access
Source of term star
Standardized terminology for access restriction Unrestricted online access
520 ## - SUMMARY, ETC.
Summary, etc By means of this 'Frontiers in Genetics' research topic, we are celebrating 30 years of the Comet Assay. The first paper on this single-cell gel electrophoresis assay was published in 1984 by O. Ostling and K.J. Johanson (Biochem. Biophys. Res. Commun. Vol.123: 291-298). The comet assay is a versatile and sensitive method for measuring single - and double-strand breaks in DNA. By including lesion-specific enzymes in the assay, its range and sensitivity are greatly increased, but it is important to bear in mind that their specificity is not absolute. The comet assay (with and without inclusion of lesion-specific enzymes) is widely used as a biomarker assay in human population studies - primarily to measure DNA damage, but increasingly also to assess the capacity of cells for DNA repair. Ostling and Johanson (Biochem. Biophys. Res. Commun., 1984) were also the first to report experiments to measure DNA repair, by simply following the decrease of DNA damage over time after challenging cells with ionising radiation. However, this approach is time-consuming and laborious as it requires an extended period of cell culture and is therefore not ideal for biomonitoring studies, which typically require high-throughput processing of many samples. As an alternative approach, the in vitro comet-based repair assay was developed: a cell extract is incubated with a DNA substrate containing specific lesions, and DNA incisions accumulate. The in vitro comet-based repair assay has been modified and improved over the past decade: it was first devised to measure base excision repair of oxidised purines in lymphocytes (Collins et al., Mutagenesis, 2001), but has since been adapted for other lesions and thus other repair pathways, as well as being applied to tissue samples in addition to cell suspensions. Even after 30 years, the comet assay is still in a growth phase, with many new users each year. Many questions are repeatedly raised, which may seem to have self-evident answers, but clearly, it is necessary to reiterate them for the benefit of the new audience, and sometimes being forced to think again about old topics can shed new light. Different applications of the comet assay are discussed in this special issue, including: genotoxicity testing in different organisms, human biomonitoring, DNA repair studies, environmental biomonitoring and clinical studies. Furthermore, we consider and where possible answer questions, including the ones raised by Raymond Tice at the 8th International Comet Assay Workshop in Perugia (Italy 2009): What is the spectrum of DNA damage detected by the various versions of the comet assay?; What are the limitations associated with each application?; What should be done to standardize the assay for biomonitoring studies?; Can the comet assay be used to monitor changes in global methylation status?; What cell types are suitable for detecting genotoxic substances and their effects in vivo and in vitro?; Can the assay be fully automated?; and more. So this 'Frontiers in Genetics' research topic is written for the beginner as well as for the experienced users of the comet assay.
540 ## - TERMS GOVERNING USE AND REPRODUCTION NOTE
Terms governing use and reproduction Creative Commons
-- https://creativecommons.org/licenses/by/4.0/
-- cc
-- https://creativecommons.org/licenses/by/4.0/
546 ## - LANGUAGE NOTE
Language note English
653 ## - INDEX TERM--UNCONTROLLED
Uncontrolled term Ecotoxicology
653 ## - INDEX TERM--UNCONTROLLED
Uncontrolled term clinical applications
653 ## - INDEX TERM--UNCONTROLLED
Uncontrolled term Alkaline comet assay
653 ## - INDEX TERM--UNCONTROLLED
Uncontrolled term DNA Repair
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Uncontrolled term Quality control
653 ## - INDEX TERM--UNCONTROLLED
Uncontrolled term Genotoxicity testing
653 ## - INDEX TERM--UNCONTROLLED
Uncontrolled term DNA Damage
653 ## - INDEX TERM--UNCONTROLLED
Uncontrolled term human biomonitoring
653 ## - INDEX TERM--UNCONTROLLED
Uncontrolled term high throughput
653 ## - INDEX TERM--UNCONTROLLED
Uncontrolled term nanotoxicology
700 1# - ADDED ENTRY--PERSONAL NAME
Personal name Sabine Langie
Relator code auth
9 (RLIN) 1578630
700 1# - ADDED ENTRY--PERSONAL NAME
Personal name Amaya Azqueta
Relator code auth
9 (RLIN) 1578631
856 40 - ELECTRONIC LOCATION AND ACCESS
Host name www.oapen.org
Uniform Resource Identifier <a href="http://journal.frontiersin.org/researchtopic/1978/30-years-of-the-comet-assay-an-overview-with-some-new-insights">http://journal.frontiersin.org/researchtopic/1978/30-years-of-the-comet-assay-an-overview-with-some-new-insights</a>
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Public note DOAB: download the publication
856 40 - ELECTRONIC LOCATION AND ACCESS
Host name www.oapen.org
Uniform Resource Identifier <a href="https://directory.doabooks.org/handle/20.500.12854/39891">https://directory.doabooks.org/handle/20.500.12854/39891</a>
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Public note DOAB: description of the publication
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